PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT01632

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

CPP

Protein Properties

Length: 612aa MW: 66396.9 Da PI: 7.9179

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT01632	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	45	2.1e-14	132	171	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g +C+ C+C++C+N+ e+ OIT01632 132 KQKQCNCKHSRCLKLYCECFASGIYCDG-CNCNNCHNNVEN 171 89************************.******9875 PP
2	TCR	50.8	3.2e-16	216	255	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e OIT01632 216 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 255 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 612 aa Download sequence
MENSEGGDFF PPNKAQSEVA VSAAAATTVQ PQVAVDFPAK KLARQLDFTV FGGSSGQSPA 60 TAMPEQTKQI QPLVKSIQLQ RPQTQQHMVL MPTKQTAVPT THPSIRPPLK PDSPRARPRQ 120 SVSEVKDGTP KKQKQCNCKH SRCLKLYCEC FASGIYCDGC NCNNCHNNVE NEPARREAVE 180 ATLERNPHAF RPKIASSPHG ARDNKEEIGD VLVLAKHNKG CHCKKSGCLK KYCECFQANI 240 LCSENCKCMD CKNFEGSEER QALFHGDHAN NMAYLQQAAN AAITGAIGSS GYGLSPVNKK 300 RKGQELFFGS SVKEPVHRHG QSQQGNHIKA SVLPSLSSVP GPCVGNAATV GPSKFTYRSL 360 LADLIQPQDL KELCSVLVLH SGETAKMLAD EKDASMKQAE GQREASLASS TQERVQNQKD 420 SSTEKDMLDC CSSGDQGEKI SVEESSLDGA DVSKRPMSPG TLALMCDESH TMFAAAVASP 480 NDLATLSCNT SSQLPHGQGM TETYAEQERI VLMKFRDCLN RLVDLGQLKE RKCSSMIRGA 540 DPVDQKDMIG NGFTTSETRN QHDSLNNGVA KSALPLPRTA QLFSAVVTTA NNNNPFPKVH 600 RPDENGDVKP KI

Sequence ? help Back to Top

Protein Sequence Length: 612 aa Download sequence

MENSEGGDFF PPNKAQSEVA VSAAAATTVQ PQVAVDFPAK KLARQLDFTV FGGSSGQSPA  60
TAMPEQTKQI QPLVKSIQLQ RPQTQQHMVL MPTKQTAVPT THPSIRPPLK PDSPRARPRQ  120
SVSEVKDGTP KKQKQCNCKH SRCLKLYCEC FASGIYCDGC NCNNCHNNVE NEPARREAVE  180
ATLERNPHAF RPKIASSPHG ARDNKEEIGD VLVLAKHNKG CHCKKSGCLK KYCECFQANI  240
LCSENCKCMD CKNFEGSEER QALFHGDHAN NMAYLQQAAN AAITGAIGSS GYGLSPVNKK  300
RKGQELFFGS SVKEPVHRHG QSQQGNHIKA SVLPSLSSVP GPCVGNAATV GPSKFTYRSL  360
LADLIQPQDL KELCSVLVLH SGETAKMLAD EKDASMKQAE GQREASLASS TQERVQNQKD  420
SSTEKDMLDC CSSGDQGEKI SVEESSLDGA DVSKRPMSPG TLALMCDESH TMFAAAVASP  480
NDLATLSCNT SSQLPHGQGM TETYAEQERI VLMKFRDCLN RLVDLGQLKE RKCSSMIRGA  540
DPVDQKDMIG NGFTTSETRN QHDSLNNGVA KSALPLPRTA QLFSAVVTTA NNNNPFPKVH  600
RPDENGDVKP KI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-176	CPP family protein

Link Out ? help Back to Top
Ensembl	OIT01632