PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT01605
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 421aa    MW: 46517.6 Da    PI: 7.0218
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT01605genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.65.2e-32226281156
   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
               k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  OIT01605 226 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 281
               68****************************************************97 PP
2Myb_DNA-binding40.66.1e-13228279148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+++++ ++v+a ++lGg    t+k I + m   g+t  ++ks++qky+
         OIT01605 228 RRCWSPDLHRRFVNALQMLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 279
                      568*****************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    
MMSSPSELSL ECKPHQSYSM LLKSFGEKID QTQNLEEFVA RLEEERVKID AFKRELPLCM  60
QLLTNAMEAS RQQLQSYKEN QGRKPVFEEF IPLKNNNASG EGDEKITNTT DHNKANWMTS  120
AQLWSPGSEE IKEKSTQTSS KEITDIGISK LAFDNNFPSP TLALASTKQS IEIVEDNKNL  180
EIVNNYSGKD NSILEQGKGG STINQQPDSQ STGAVTNSTS TQQHRKARRC WSPDLHRRFV  240
NALQMLGGSQ VATPKQIREL MKVDGLTNDE VKSHLQKYRL HTRRPSPSPQ VATSAPHLVV  300
LGGIWVPPEY AAAAAHGGAP PAATLYGAHP TSHAPSPHYI AAPHGTMAQE FYTTTAPQPL  360
QSLHHLQHHH QHQQLYHHGG QMYKPPSNSH TQSSPEPESR GTGHGGDRSE SIEDGKSESS  420
S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.11e-102G2-like family protein