PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT01473 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | HSF | ||||||||
Protein Properties | Length: 148aa MW: 16474.6 Da PI: 4.2275 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 76.9 | 3.3e-24 | 72 | 130 | 2 | 60 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 Fl+k++++++d++l+ +isw ++g+sfvv+d+ ef++ +Lpk Fkh+nf+SFvRQLn+Y OIT01473 72 FLSKTFDLVDDSSLDLIISWGSKGESFVVWDPVEFSRMILPKNFKHNNFSSFVRQLNTY 130 9********************************************************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 148 aa Download sequence |
MNPFDKNPIS QPPGSESDTL PPHSITMDPE FAVYSEPPTS PFINLESFSA GEEGLGVVQP 60 MECLHGTQIP PFLSKTFDLV DDSSLDLIIS WGSKGESFVV WDPVEFSRMI LPKNFKHNNF 120 SSFVRQLNTY VGITLAQSQE YLAHVLLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03720.1 | 1e-25 | HSF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT01473 |