PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT01338 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 247aa MW: 27930.4 Da PI: 5.8493 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.8 | 5.5e-18 | 59 | 109 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr++ + +Wv+e+r+ps+ +kr++lg++ t+e+Aa+a++ a+++l+g+ OIT01338 59 IYRGVRRRN-NDKWVCELREPSK---QKRIWLGTYPTPEMAARAHDVAALALRGN 109 69****887.8*********964...5*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MANINSISCS LDSNHSQETL SSSSERSSAA PDEGIILLAS SRPKKRAGRK KFKETRHPIY 60 RGVRRRNNDK WVCELREPSK QKRIWLGTYP TPEMAARAHD VAALALRGNS ATLNFADSLW 120 RLPVIVSKDP KDLRQAAVKA AEAFRQDPEL VGFDYMNEEV NSNEEVKCQE NVVNGSGNDM 180 GVKEVKMKNM EMENILCCNW GEDSEESWQK KMAEGLLFSP TPRLGNCFSW DDVEISDVEV 240 SLWNYNI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12610.1 | 4e-46 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT01338 |