PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT01281 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WRKY | ||||||||
Protein Properties | Length: 563aa MW: 62747.6 Da PI: 8.3177 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 105.2 | 3.5e-33 | 228 | 285 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkver+ d++++ei+Y+g+Hnh+k OIT01281 228 EDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERNL-DGHITEIVYKGNHNHPK 285 8****************************************.***************85 PP | |||||||
2 | WRKY | 106 | 2e-33 | 392 | 450 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gCpv+k+ver+++d ++v++tYeg+Hnh+ OIT01281 392 LDDGYRWRKYGQKVVKGNPNPRSYYKCTFTGCPVRKHVERASHDLRAVITTYEGKHNHD 450 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 563 aa Download sequence |
MASSGGNMNT FMNSFTSNYS FSSFSDLLSD NNNNNNNNNN MRSNNSSMNQ EKNSLNWGFS 60 DQRMNQQNKD EVPKFKSFPP CSLPMISSSS PASPSSYLAF PPSLSPSVLL DSPVLFNNSN 120 TLPSPTTGSF GNLNSKEDNS KISDFSFQSR AATSSSMFQS SAPRNSLEDL MTRQQHANQQ 180 NEFSTAKTTG VKSEVAQIQS FSQEKMQSYP APVHYTQPSQ YVREQKAEDG YNWRKYGQKQ 240 VKGSENPRSY YKCTFPNCPT KKKVERNLDG HITEIVYKGN HNHPKPQSTR RSSSQSIQNL 300 AYSNLDITNQ PNAFLDNAQR DSFAGTDNSS ASFGDEDVDQ GSPISKSGED DGNEPEAKRW 360 KCDNENEVIS SASRTVREPR IVVQTTSDID ILDDGYRWRK YGQKVVKGNP NPRSYYKCTF 420 TGCPVRKHVE RASHDLRAVI TTYEGKHNHD VPAARGSGSY AMNKPPSGNS NNSMPVVPRP 480 SMLANNSNQG MNFNDTFFNT RVQTTQNQPP ITLQMLQSSG SSSYSGFDTS SGSYMDQMQP 540 MNNTKPISKE EPKDDLFFSS FLN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38470.1 | 1e-119 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT01281 |