PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT01201

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Dof

Protein Properties

Length: 392aa MW: 41659.8 Da PI: 9.7219

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT01201	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124	4.8e-39	79	139	3	63
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 e+alkcprC+s+ntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+sss OIT01201 79 ETALKCPRCESSNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSSS 139 6789*****************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MVFSSIPAYL DQANWQQQSG GSIPNHHQLT SPLSQTATPP PLPPPPPPPQ PHGSSGGAGS 60 IRPGSMADRA RLANIPMPET ALKCPRCESS NTKFCYFNNY SLSQPRHFCK TCRRYWTRGG 120 ALRNVPVGGG CRRNKRSSSK SSNNNSNNTS KSPASSTSTD GRQAANNNSG STSTISSHSN 180 SFSGPTSATS LLGLMSPQIP PLRFLSPLGQ LSDHHHQFST PGNNMNLNFS TTGNVLGGTS 240 EGMMVNNNNL LGVGGGAGGS GVASLLSSVN IEHWRMQQQQ MAQQFPNFFG GFDPSNSPSG 300 VNNYQYFQGG VNEGVQFLGG NESTTSQIRP KISTSMLNQM ASVKMEDNNH NQDQSALSRQ 360 LLGIQGNENW NTASAWSDLS ASFSSSSTSN AL

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MVFSSIPAYL DQANWQQQSG GSIPNHHQLT SPLSQTATPP PLPPPPPPPQ PHGSSGGAGS  60
IRPGSMADRA RLANIPMPET ALKCPRCESS NTKFCYFNNY SLSQPRHFCK TCRRYWTRGG  120
ALRNVPVGGG CRRNKRSSSK SSNNNSNNTS KSPASSTSTD GRQAANNNSG STSTISSHSN  180
SFSGPTSATS LLGLMSPQIP PLRFLSPLGQ LSDHHHQFST PGNNMNLNFS TTGNVLGGTS  240
EGMMVNNNNL LGVGGGAGGS GVASLLSSVN IEHWRMQQQQ MAQQFPNFFG GFDPSNSPSG  300
VNNYQYFQGG VNEGVQFLGG NESTTSQIRP KISTSMLNQM ASVKMEDNNH NQDQSALSRQ  360
LLGIQGNENW NTASAWSDLS ASFSSSSTSN AL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37590.1	8e-46	Dof family protein

Link Out ? help Back to Top
Ensembl	OIT01201