PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT01182 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 245aa MW: 27111.8 Da PI: 4.7891 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.3 | 6.9e-17 | 36 | 85 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ykGVr++ +g+WvAeIr+p + r +r +lg+f ++Aa a++aa++kl+g OIT01182 36 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFENSYDAAVAYDAAARKLYG 85 69****999.**********8...3.35*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MSSTYSVERK TKKITQATSR KGCMRGKGGP ENASCTYKGV RQRTWGKWVA EIREPNRGAR 60 LWLGTFENSY DAAVAYDAAA RKLYGADAKL NLPHLYNKQA QAQNSRPNTM GLDNAGGPVS 120 APPTCNPAAF YNVASPSTWS MGNDHTSFFF NNYFGNNSFS TADQTSFQFL DINQTAEEFD 180 ENNINQNEGI GGEMWRDLNM NLPEIDDSSI WEEAKASTSF QEAVSDPGIY ACNLDDGINY 240 PPWCG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 7e-40 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT01182 |