PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT01040 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 250aa MW: 27995.3 Da PI: 4.6192 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.4 | 1.2e-20 | 99 | 149 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr+++ +grW+AeIrdp+ r kr++lg+++t+eeAa +++a+ l+g OIT01040 99 KKYRGVRQRP-WGRWAAEIRDPT----RgKRVWLGTYDTPEEAATVYDRAAVMLKG 149 59********.**********84....35*********************988876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MILQPPVKFS EHLVTTNKQV HELNMKNPQK VVRIILTDGD ATDSSDDEDD QFMVRRVKRY 60 VTKINFTLLP ESPKQESQPQ QSSRKRCLPS SDSDVGCRKK YRGVRQRPWG RWAAEIRDPT 120 RGKRVWLGTY DTPEEAATVY DRAAVMLKGP DAVTNFALVS PAIETSEAES IIVSPAKTEV 180 SSKDVALSPT SVLRSDDFGP FDGSLGFSEV DAFGFEIDSP FGLTGFGMSE KYFAEEFSEF 240 DFDDFAVEVT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23750.1 | 1e-29 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT01040 |