PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT00968

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 374aa MW: 41791.7 Da PI: 8.487

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT00968	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.5	1.1e-31	61	114	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH rF++ave+LGG+++AtPk +l++m++kgL ++hvkSHLQ+YR+ OIT00968 61 PRLRWTPDLHLRFIHAVERLGGQDRATPKLVLQMMNIKGLNIAHVKSHLQMYRS 114 8****************************************************7 PP
2	Myb_DNA-binding	51.9	1.8e-16	62	113	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++++av++lGg t+k++ ++m+ kg+ ++ks++q+y+ OIT00968 62 RLRWTPDLHLRFIHAVERLGGQdraTPKLVLQMMNiKGLNIAHVKSHLQMYR 113 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MMGDSGETGC NSKTSSNSGK YEDDEENNSS KFKDGGSSSN STVEESEKKP FVRPYVRSKM 60 PRLRWTPDLH LRFIHAVERL GGQDRATPKL VLQMMNIKGL NIAHVKSHLQ MYRSKKMDDQ 120 SQGIAHHRLF MEGGDPNIYN LSQLPMFPTF HQRLNSTLRY EDASWNCHGN WTMGQGTLDR 180 SSRGFHTTLT ERIFGSNHGR EANEDLCKRN PSFISERSNL QKHEIKDKMV LSLEHESHSG 240 ELTPILSHIA AKAQARAINL QKQTPLKRKV SDCDLDLNLS LGVKPRNGSD NLCCTDFPKM 300 LPYSCPILQR DITFGGSNTQ SPSNNDDNDN GSSLSLSLSS PLSSSKVTRF KEDGNSNATT 360 ENARRGASTL DLTL

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MMGDSGETGC NSKTSSNSGK YEDDEENNSS KFKDGGSSSN STVEESEKKP FVRPYVRSKM  60
PRLRWTPDLH LRFIHAVERL GGQDRATPKL VLQMMNIKGL NIAHVKSHLQ MYRSKKMDDQ  120
SQGIAHHRLF MEGGDPNIYN LSQLPMFPTF HQRLNSTLRY EDASWNCHGN WTMGQGTLDR  180
SSRGFHTTLT ERIFGSNHGR EANEDLCKRN PSFISERSNL QKHEIKDKMV LSLEHESHSG  240
ELTPILSHIA AKAQARAINL QKQTPLKRKV SDCDLDLNLS LGVKPRNGSD NLCCTDFPKM  300
LPYSCPILQR DITFGGSNTQ SPSNNDDNDN GSSLSLSLSS PLSSSKVTRF KEDGNSNATT  360
ENARRGASTL DLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-58	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT00968