PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT00871

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 422aa MW: 47862.9 Da PI: 8.1121

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT00871	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	161.2	3.9e-50	42	168	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 + pGfrF Ptdeel+++yLkkkveg++ + evi+ev+i k+ePwdLp k++ ++++ew+fFs+r +ky++g++++rat+sgyWkatgk+++v+s +++ + OIT00871 42 MFPGFRFCPTDEELISYYLKKKVEGSDKCV-EVISEVEIWKHEPWDLPdKSIVQSDNEWFFFSPRGRKYPNGSQSKRATESGYWKATGKERNVKS-GSNMI 140 579**********************777.99***********778888999**********************************.99* PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g+k+tLvf++grapkg++t+W+mhey + OIT00871 141 GTKRTLVFHTGRAPKGQRTQWIMHEYCM 168 **************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MEDGDVSGST DENKATKIVQ RSENINGNDK NVEISVATAS TMFPGFRFCP TDEELISYYL 60 KKKVEGSDKC VEVISEVEIW KHEPWDLPDK SIVQSDNEWF FFSPRGRKYP NGSQSKRATE 120 SGYWKATGKE RNVKSGSNMI GTKRTLVFHT GRAPKGQRTQ WIMHEYCMTG NSYYQDSVVV 180 CRLRKNNEFH LNDTHGNRRN HLANDCATAL SGAGQLDSLE LINGGDCCSK EGSSSFSSHS 240 VEKIESGSSD KLTKELPQHH SSSHWKDCDE EDCFADIMKD DIVKLDDSSY KARYNLLPIV 300 NRKPDSSTNS STEESQDLMS HRLPFQGTAN RRLRLQTEIV PRRVERSEAY EANKKNGRAV 360 DSSRHLRINI IPVRRIKQWS IPLLLVSLAL LVIFLCMFGL PQVKWLRHLL VITPAEVNTR 420 PA

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MEDGDVSGST DENKATKIVQ RSENINGNDK NVEISVATAS TMFPGFRFCP TDEELISYYL  60
KKKVEGSDKC VEVISEVEIW KHEPWDLPDK SIVQSDNEWF FFSPRGRKYP NGSQSKRATE  120
SGYWKATGKE RNVKSGSNMI GTKRTLVFHT GRAPKGQRTQ WIMHEYCMTG NSYYQDSVVV  180
CRLRKNNEFH LNDTHGNRRN HLANDCATAL SGAGQLDSLE LINGGDCCSK EGSSSFSSHS  240
VEKIESGSSD KLTKELPQHH SSSHWKDCDE EDCFADIMKD DIVKLDDSSY KARYNLLPIV  300
NRKPDSSTNS STEESQDLMS HRLPFQGTAN RRLRLQTEIV PRRVERSEAY EANKKNGRAV  360
DSSRHLRINI IPVRRIKQWS IPLLLVSLAL LVIFLCMFGL PQVKWLRHLL VITPAEVNTR  420
PA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G44290.1	4e-83	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT00871