PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT00773

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Protein Properties

Length: 849aa MW: 93468.5 Da PI: 7.0443

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT00773	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.9	4.4e-19	329	428	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 f+kvl+ sd+++ grlvlpk +ae++ +++ + ++++d +g++W++++++ +++s++yvl+ G + +L++gD+v+F++++ +++lv++++ OIT00773 329 FEKVLSASDAGRIGRLVLPKACAEAYfpPINQSDGLPIRIQDIKGKEWTFQFRFwpNNNSRMYVLE-GVTPCIQNMQLQAGDTVTFSRID-PGGKLVMGFR 427 99************************556666778***********99899999999.*******************887.7887888877 PP - CS B3 98 r 98 + OIT00773 428 K 428 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 849 aa Download sequence
MGSMICMNEV CRKTTSSEWK KGWSLKSGGF ANLCYNCGSA FENLAFCETF HMGDSGWRKC 60 KMCGKHLHCG CIASKYLFEY LDFGGVGCIS CARRLDGHSM RSMQVPADDF RNNTFGTNFI 120 QPLHVEKGVD ETNFDKGRLP TVNNIMEISE PGQPFQSQKD DNNVSLGKTK QEKVLPVGDV 180 STCFSNLNQQ SMASLFREQD NSKPNQGVKE MYDTTNQPSL DFSLSTPVGC SSPGLSFPGG 240 GVEGREHEKT PPFQQGLRTR HILLKPPKPS PSFGSDSNKE LLSQTRIARP PAEGRGGRNQ 300 LLPRYWPRIT EQELRQLSGD LKSTIVPLFE KVLSASDAGR IGRLVLPKAC AEAYFPPINQ 360 SDGLPIRIQD IKGKEWTFQF RFWPNNNSRM YVLEGVTPCI QNMQLQAGDT VTFSRIDPGG 420 KLVMGFRKAT NSVETQDPQS SHLPDGSGSA DTSFTGLTEN LNNGGRTSAD SVHRQMPVSE 480 KKKTTNIGST NKRLLMHADD AMELTITWEE SQELLRPPPT TQPTILVIEH CEFAAYDEPP 540 VFGKQTIFTS RPSGDREQWA QCDSCSKWRR LPMHVLLPPK WACSDNIWDS NRCSCSAPEE 600 IKAKELEAFF RVSNGHKRQK IAGKNEDCEP SGLNALATVA VLGDNIGDLG EPLVGATTKH 660 PRHRPGCTCI VCIQPPSGKG KHQPTCKCNA CLSAERRFKT LMLRKKKKQS EREAEVAQAK 720 DQIPPKDGSE TDGASGAELM MQTSHSENER YTNGDLMEKV GAGKGQLDLN CHPNREDEML 780 IEAAAGISMT SLINAADLPL DMYQTQNGLA TLGKCLLSLA TAENEGQQPD NGCVRPADAQ 840 VQENNGDNG

Sequence ? help Back to Top

Protein Sequence Length: 849 aa Download sequence

MGSMICMNEV CRKTTSSEWK KGWSLKSGGF ANLCYNCGSA FENLAFCETF HMGDSGWRKC  60
KMCGKHLHCG CIASKYLFEY LDFGGVGCIS CARRLDGHSM RSMQVPADDF RNNTFGTNFI  120
QPLHVEKGVD ETNFDKGRLP TVNNIMEISE PGQPFQSQKD DNNVSLGKTK QEKVLPVGDV  180
STCFSNLNQQ SMASLFREQD NSKPNQGVKE MYDTTNQPSL DFSLSTPVGC SSPGLSFPGG  240
GVEGREHEKT PPFQQGLRTR HILLKPPKPS PSFGSDSNKE LLSQTRIARP PAEGRGGRNQ  300
LLPRYWPRIT EQELRQLSGD LKSTIVPLFE KVLSASDAGR IGRLVLPKAC AEAYFPPINQ  360
SDGLPIRIQD IKGKEWTFQF RFWPNNNSRM YVLEGVTPCI QNMQLQAGDT VTFSRIDPGG  420
KLVMGFRKAT NSVETQDPQS SHLPDGSGSA DTSFTGLTEN LNNGGRTSAD SVHRQMPVSE  480
KKKTTNIGST NKRLLMHADD AMELTITWEE SQELLRPPPT TQPTILVIEH CEFAAYDEPP  540
VFGKQTIFTS RPSGDREQWA QCDSCSKWRR LPMHVLLPPK WACSDNIWDS NRCSCSAPEE  600
IKAKELEAFF RVSNGHKRQK IAGKNEDCEP SGLNALATVA VLGDNIGDLG EPLVGATTKH  660
PRHRPGCTCI VCIQPPSGKG KHQPTCKCNA CLSAERRFKT LMLRKKKKQS EREAEVAQAK  720
DQIPPKDGSE TDGASGAELM MQTSHSENER YTNGDLMEKV GAGKGQLDLN CHPNREDEML  780
IEAAAGISMT SLINAADLPL DMYQTQNGLA TLGKCLLSLA TAENEGQQPD NGCVRPADAQ  840
VQENNGDNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein

Link Out ? help Back to Top
Ensembl	OIT00773