PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT00683 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 120aa MW: 14182.1 Da PI: 4.7914 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 35.4 | 1.9e-11 | 17 | 97 | 1 | 89 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+ v ++ ++ + + l++p+k ++ +++ l + +g++W v + + +++r +++GWk Fv +n +k g +v F+l++ s+ OIT00683 17 FEVV-MTDSYINYDDLYIPRKIYKHLP----LTVETALLHYRGKEWFVSM--SVGDRR-RFKEGWKLFVLDNYVKRGFVVKFMLVDVSS 97 4444.5666666667*******95555....457899*************..555444.4899********************987655 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 120 aa Download sequence |
LTYSCTSEDE EENPPTFEVV MTDSYINYDD LYIPRKIYKH LPLTVETALL HYRGKEWFVS 60 MSVGDRRRFK EGWKLFVLDN YVKRGFVVKF MLVDVSSLYV DFNVEVKGEG THDRNPVEID |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G06220.1 | 4e-07 | B3 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT00683 |