PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT00595

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

WRKY

Protein Properties

Length: 731aa MW: 79607.4 Da PI: 6.4066

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT00595	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.8	9.7e-33	314	371	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers+ +++++ei+Y+g Hnh+k OIT00595 314 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSH-EGHITEIIYKGAHNHPK 371 8**************************************.*************85 PP
2	WRKY	104.1	7.4e-33	528	586	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k v++tYeg+Hnh+ OIT00595 528 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCNVRKHVERASHDLKSVITTYEGKHNHD 586 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 731 aa Download sequence
MGGFDDHVAI MGDWMPPSPS PRTFFSSLLG DDIGSRSTFE FPNENKRGNL ASEPQEHVGN 60 SDGAQTDATT VKSDQKMSSR GGLLERMAAR AGFNAPKLNT ESLRPADLSQ DQGVRSPYLT 120 IPPGLSPTSL LESPVFLSNS LVQPSPTTGK FQFASGIESR NSTFMMEDPD KRKENALESI 180 NSSSFSFKPV PETAPSLFPG ATSRSWLQVN SSNISQQCFP NNKVSVHSQN SLLSHCMEAT 240 QMQTQNEKGL HQSSDFPRFS AEKDVRDSNV TPDSTNFQTV GSNVEHSPPL DEPQDEEIDQ 300 RVGGDPNVVG APAEDGYNWR KYGQKQVKGS EYPRSYYKCT HPNCPVKKKV ERSHEGHITE 360 IIYKGAHNHP KPLPNRRSTL GSTNSLGELQ LDGAEQGVSG SNGDLGRANI QKASDAGGLD 420 WRNNNLDVTS SAHLGSAYCN GSASFPVQNN TQLESGGAVD VSSTFSNDED EDDRGTHGSV 480 SQGYDGEGDE SESKRRKLET YSTDMSGATR AIREPRVVVQ TTSEVDILDD GYRWRKYGQK 540 VVKGNPNPRS YYKCTSAGCN VRKHVERASH DLKSVITTYE GKHNHDVPAA RNSSHVNSGA 600 SNTLPAPVTA PPAQSHLHRP EPAQLQNAMA RFDRQPSLGS FGPTPGFSYG MNQQSLASLA 660 MAGFHPNQSK SQQQVPVHSY LGQPRPMHDG GFMFPKEEPK AEPMSDPGLD LSNGSSIYQQ 720 FMSRLPLGPQ M

Sequence ? help Back to Top

Protein Sequence Length: 731 aa Download sequence

MGGFDDHVAI MGDWMPPSPS PRTFFSSLLG DDIGSRSTFE FPNENKRGNL ASEPQEHVGN  60
SDGAQTDATT VKSDQKMSSR GGLLERMAAR AGFNAPKLNT ESLRPADLSQ DQGVRSPYLT  120
IPPGLSPTSL LESPVFLSNS LVQPSPTTGK FQFASGIESR NSTFMMEDPD KRKENALESI  180
NSSSFSFKPV PETAPSLFPG ATSRSWLQVN SSNISQQCFP NNKVSVHSQN SLLSHCMEAT  240
QMQTQNEKGL HQSSDFPRFS AEKDVRDSNV TPDSTNFQTV GSNVEHSPPL DEPQDEEIDQ  300
RVGGDPNVVG APAEDGYNWR KYGQKQVKGS EYPRSYYKCT HPNCPVKKKV ERSHEGHITE  360
IIYKGAHNHP KPLPNRRSTL GSTNSLGELQ LDGAEQGVSG SNGDLGRANI QKASDAGGLD  420
WRNNNLDVTS SAHLGSAYCN GSASFPVQNN TQLESGGAVD VSSTFSNDED EDDRGTHGSV  480
SQGYDGEGDE SESKRRKLET YSTDMSGATR AIREPRVVVQ TTSEVDILDD GYRWRKYGQK  540
VVKGNPNPRS YYKCTSAGCN VRKHVERASH DLKSVITTYE GKHNHDVPAA RNSSHVNSGA  600
SNTLPAPVTA PPAQSHLHRP EPAQLQNAMA RFDRQPSLGS FGPTPGFSYG MNQQSLASLA  660
MAGFHPNQSK SQQQVPVHSY LGQPRPMHDG GFMFPKEEPK AEPMSDPGLD LSNGSSIYQQ  720
FMSRLPLGPQ M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-177	WRKY family protein

Link Out ? help Back to Top
Ensembl	OIT00595