PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT00450
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WOX
Protein Properties Length: 310aa    MW: 34972.4 Da    PI: 7.0383
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT00450genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.85e-2049110257
               T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
  Homeobox   2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
               ++R+t+t++q+++L++l+++   r p+ae+++++++kl    +++ ++V++WFqN++a+e++
  OIT00450  49 STRWTPTTDQIRILKDLYYNngVRSPTAEQIQRISAKLrqygKIEGKNVFYWFQNHKARERQ 110
               58*****************8678*************************************97 PP

2Wus_type_Homeobox114.16.9e-3748112265
  Wus_type_Homeobox   2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        ++tRWtPt++Qi+iL++ly+ +G+r+P++e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+
           OIT00450  48 SSTRWTPTTDQIRILKDLYYnNGVRSPTAEQIQRISAKLRQYGKIEGKNVFYWFQNHKARERQKK 112
                        789***************9779*****************************************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MEAAQQQNQQ HYLHQQHLSI GQVANNIEDG VGGNSSKNNS SSFMCRQSST RWTPTTDQIR  60
ILKDLYYNNG VRSPTAEQIQ RISAKLRQYG KIEGKNVFYW FQNHKARERQ KKRLIAAAAT  120
DSNNNIPMQM RGVWRSADDP IHHKYNNTTG IHCPSASSHG VLAVGQNGNY GYGTLAMEKS  180
FRDCSISPGG NSNGSMGHQN ITWVGVDPYT SHQAYPFLEK TKHFDETLVD DYEELQQEEE  240
NYQRASALET LPLFPMHEEN ISSFCNIKHE SSGGFYTEWY RSDDHNLAAA ARASLELSLN  300
SFIGRSPNSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.15e-43WOX family protein