PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT00245
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 131aa    MW: 14952.8 Da    PI: 8.2219
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT00245genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.21.1e-1138119190
               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
               f+ ++t s v  ++ l++p+k + +h ++++   +  + + +g++W v++  + +++r  ++ GW++Fv +n ++ g +v F+l++ s  
  OIT00245  38 FEVAMTDSCVDDND-LYIPRKIC-KH-LPPTL--EHAFLNHRGKEWYVNM--SAGDQR-RFKVGWRRFVLENFIRRGFVVKFTLVDVSPL 119
               66677777777777.********.66.34444..68999***********..666666.4899********************9876555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
MDASSSIKRA LSYSSTRSDA LSYSSTSSDN EDENPPTFEV AMTDSCVDDN DLYIPRKICK  60
HLPPTLEHAF LNHRGKEWYV NMSAGDQRRF KVGWRRFVLE NFIRRGFVVK FTLVDVSPLR  120
AIFNVQVKGD G