PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT00233 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WRKY | ||||||||
Protein Properties | Length: 298aa MW: 33340.9 Da PI: 6.164 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 106.1 | 1.8e-33 | 162 | 219 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCts++C+vkk+vers edp+vv++tYeg+Hnh+ OIT00233 162 EDGYRWRKYGQKAVKNSPFPRSYYRCTSQKCSVKKRVERSYEDPSVVITTYEGQHNHH 219 8********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence |
MSDNNPFYHD YMGTGGVNNA FSFFGDQNPS IYDQIPTNTQ TPHQDFDPSS YMSTLTECLH 60 GSMDYNSLSN VLCSSSEVVC PPLDQGAEIP LTPNSLVSSS SSEAGGEEDS SKSKKDLQGK 120 DQCEDGDDDK SKKVSKAKKK GEKKQKEPRF AFMTKSEIDN LEDGYRWRKY GQKAVKNSPF 180 PRSYYRCTSQ KCSVKKRVER SYEDPSVVIT TYEGQHNHHC PATLRGNAAA AMLSPSFLSS 240 SQLIPQDVLF AQMLTTPTNQ NQLPINYSVY NYQQQPQLGP EYGLFQDMVA SLIHKREP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29860.1 | 8e-52 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT00233 |