PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT00167

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

GeBP

Protein Properties

Length: 427aa MW: 47668.7 Da PI: 5.0642

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT00167	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	108.5	4.7e-34	176	268	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 ++rlws+eD++++L+G+ +fka++g++p + d++af++f+k++++++vsksq+++K+rrLKkKf +++k g+ep+fsk+hd +fe+skkiWg OIT00167 176 PSRLWSDEDQLAILKGMAEFKAQKGSEPNAtDMSAFHDFIKGKLQVEVSKSQVTDKLRRLKKKFVTNMKI---GEEPVFSKPHDYLMFEFSKKIWG 268 68**********************99988***********************************...********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MAPKSKSRLV DQPPSASSSE EQDPQQAEES QEEEEAQSEE EQEEEESGEE ESDEEEEEEP 60 KTAPPLEKKP TSQKPLQTPQ NKLQSSSSES GTEDGSGSDS DSESGQSQPS PSASDFTVKP 120 SIPAAKSPSK PLSKRPQETQ QQQAQKEKHS RPNKKPKISE EDSKVSEEKK SAATTPSRLW 180 SDEDQLAILK GMAEFKAQKG SEPNATDMSA FHDFIKGKLQ VEVSKSQVTD KLRRLKKKFV 240 TNMKIGEEPV FSKPHDYLMF EFSKKIWGDA GTSNTNGVNE NVNNGTNGKA KKTVDVVKKS 300 TAEPKRSAKI STFTKPKDDE KPKEDEKRAA VKEVDKEDVV VKGDDRQDFR SKYPNLAASF 360 SLPAMSSIFP NGVDIFKENM SLIASDKAKV LEEKWKKLHD DEHDLMLKRL DLIREHYKLV 420 VDARRGN

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MAPKSKSRLV DQPPSASSSE EQDPQQAEES QEEEEAQSEE EQEEEESGEE ESDEEEEEEP  60
KTAPPLEKKP TSQKPLQTPQ NKLQSSSSES GTEDGSGSDS DSESGQSQPS PSASDFTVKP  120
SIPAAKSPSK PLSKRPQETQ QQQAQKEKHS RPNKKPKISE EDSKVSEEKK SAATTPSRLW  180
SDEDQLAILK GMAEFKAQKG SEPNATDMSA FHDFIKGKLQ VEVSKSQVTD KLRRLKKKFV  240
TNMKIGEEPV FSKPHDYLMF EFSKKIWGDA GTSNTNGVNE NVNNGTNGKA KKTVDVVKKS  300
TAEPKRSAKI STFTKPKDDE KPKEDEKRAA VKEVDKEDVV VKGDDRQDFR SKYPNLAASF  360
SLPAMSSIFP NGVDIFKENM SLIASDKAKV LEEKWKKLHD DEHDLMLKRL DLIREHYKLV  420
VDARRGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	1e-20	GeBP family protein

Link Out ? help Back to Top
Ensembl	OIT00167