PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT00041

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 424aa MW: 45779.8 Da PI: 9.6699

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT00041	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	66.9	3.4e-21	281	343	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+e+kre+rkq+NRe+ArrsR+RK+ae eeL+ +v++L++eN Lk+e+++ +++++klk e+ OIT00041 281 EREIKREKRKQSNRESARRSRLRKQAEAEELAIRVQSLTSENLGLKSEINKFTENSEKLKLEN 343 89**********************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MGNSEEGKSC KPEKSSSTAP DQSNIHVYPD WAAMQAYYGP RVAVPPYVNS PVAPGHAPHP 60 YMWGPLQPMM PPYGAPYAGI YAHGGVYAHP GVPIVSRPQA HGMTSSPAIS QTMDAASLSM 120 DTSAKSSGNT DQRTSKLKGS NGLGVSIGNC CVDNGDGTDH GPSQSGHTEG SSDGSNIHTT 180 EAGENSKKRS RETTRNDSGD RKTQTRSSPQ PREVNGATKK ETSIAISPGN IAEKVVGTVF 240 SPTMTTTPEL RNHVGTLVKA SPTNVSRISP AVPAEVWLQN EREIKREKRK QSNRESARRS 300 RLRKQAEAEE LAIRVQSLTS ENLGLKSEIN KFTENSEKLK LENAALMERL KNKRRGQAEE 360 VTLGKIDDKR LQPVSTADLL ARVNNSGPLD RTNDDSEIRE NNTSGAKLHQ LLDASRRTDA 420 VAAR

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MGNSEEGKSC KPEKSSSTAP DQSNIHVYPD WAAMQAYYGP RVAVPPYVNS PVAPGHAPHP  60
YMWGPLQPMM PPYGAPYAGI YAHGGVYAHP GVPIVSRPQA HGMTSSPAIS QTMDAASLSM  120
DTSAKSSGNT DQRTSKLKGS NGLGVSIGNC CVDNGDGTDH GPSQSGHTEG SSDGSNIHTT  180
EAGENSKKRS RETTRNDSGD RKTQTRSSPQ PREVNGATKK ETSIAISPGN IAEKVVGTVF  240
SPTMTTTPEL RNHVGTLVKA SPTNVSRISP AVPAEVWLQN EREIKREKRK QSNRESARRS  300
RLRKQAEAEE LAIRVQSLTS ENLGLKSEIN KFTENSEKLK LENAALMERL KNKRRGQAEE  360
VTLGKIDDKR LQPVSTADLL ARVNNSGPLD RTNDDSEIRE NNTSGAKLHQ LLDASRRTDA  420
VAAR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	298	304	RRSRLRK
2	298	305	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	1e-102	bZIP family protein

Link Out ? help Back to Top
Ensembl	OIT00041