PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS99906

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

TALE

Protein Properties

Length: 502aa MW: 56743.5 Da PI: 7.7133

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS99906	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.5	2.5e-09	317	349	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ +++ LA+++gL+ +qV++WF N R + OIS99906 317 HPYPTDTDKVMLANQTGLSRNQVSNWFINARVR 349 89*****************************88 PP
2	BELL	105	5e-34	177	246	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+ kkk++L+ +l+eV++rYkqy++qlq+v+ sFe vaglg+a+p+++lAlk++S+hF cLk+ai++q+ OIS99906 177 DEHGKKKSRLILMLDEVYQRYKQYHQQLQMVVTSFESVAGLGNAAPFANLALKTMSKHFNCLKNAITDQL 246 5899***************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MAEGFEPYHV PQQSRRDKLR VLVDDNLQLQ NYAPYYDPSI ITSDLPTFQE INGTPFLYTP 60 QNLRFLDQSF RTSGEDMVHN SNNNNTNGQG LSLSLSSLHH NNTRNHELSS KSSCVPLGPF 120 TGYSLILKRS RFLKPAQLLL EELCDVGREK LEAEDSNLMD FRHENIVVDR QDCSNGDEHG 180 KKKSRLILML DEVYQRYKQY HQQLQMVVTS FESVAGLGNA APFANLALKT MSKHFNCLKN 240 AITDQLQFTN EYRHGQRICE RDSIPRVGKG LFCRKPDQIH NNAGFADRTH PVWRPQRGLP 300 ERAVTVLRAW LFDHFLHPYP TDTDKVMLAN QTGLSRNQVS NWFINARVRL WKPMVEEIHM 360 LETKEAHNKA SQREGQNSNN NSIEHFPTSN SHAACETPST SAPRLQDTPP KRTRNDFPMG 420 NTDSISLSYA NLSTGTGGVS LTLGLHQNTG IGLSEPFPIN AARRFGIDAN SDRFMVGGGF 480 EQQNGQFGRN IVGGQFLHDF AG

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MAEGFEPYHV PQQSRRDKLR VLVDDNLQLQ NYAPYYDPSI ITSDLPTFQE INGTPFLYTP  60
QNLRFLDQSF RTSGEDMVHN SNNNNTNGQG LSLSLSSLHH NNTRNHELSS KSSCVPLGPF  120
TGYSLILKRS RFLKPAQLLL EELCDVGREK LEAEDSNLMD FRHENIVVDR QDCSNGDEHG  180
KKKSRLILML DEVYQRYKQY HQQLQMVVTS FESVAGLGNA APFANLALKT MSKHFNCLKN  240
AITDQLQFTN EYRHGQRICE RDSIPRVGKG LFCRKPDQIH NNAGFADRTH PVWRPQRGLP  300
ERAVTVLRAW LFDHFLHPYP TDTDKVMLAN QTGLSRNQVS NWFINARVRL WKPMVEEIHM  360
LETKEAHNKA SQREGQNSNN NSIEHFPTSN SHAACETPST SAPRLQDTPP KRTRNDFPMG  420
NTDSISLSYA NLSTGTGGVS LTLGLHQNTG IGLSEPFPIN AARRFGIDAN SDRFMVGGGF  480
EQQNGQFGRN IVGGQFLHDF AG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	1e-100	TALE family protein

Link Out ? help Back to Top
Ensembl	OIS99906