PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS99676
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 279aa    MW: 31330.9 Da    PI: 6.7936
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS99676genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.7e-19135185255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               +y+GVr+++ +g++++eIrdp+ +g  +r++lg+f ta eAaka+++a+ k++g
  OIS99676 135 HYRGVRQRP-WGKYASEIRDPTRRG--ARVWLGTFNTAVEAAKAYDRAAFKMRG 185
               7********.**********97665..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MTESSSSQSE SASSDSLPFD FLSDSFDFEA DFFQFGKEVS NSSAESANSV HNSTNFIKLE  60
SEPTLSSSEY EKSQVIIDLT SPKLSNVSDR KPSLKIDLPP VKKFEWIGFG NSTTQSNSIV  120
SVTMQQNRKT EEKRHYRGVR QRPWGKYASE IRDPTRRGAR VWLGTFNTAV EAAKAYDRAA  180
FKMRGSKAIL NFPLEVGKNL SYSSSAMDGS VKRRRESEEC GDEKEVKKVE KCKEEESWPL  240
TPSSWNFLWE QNTNGMLNLP PLSPLSPHPS LGCSQLIQI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1212231KRRRESEECGDEKEVKKVEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.12e-45ERF family protein