PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS99656
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 294aa    MW: 33627.7 Da    PI: 4.8827
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS99656genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY81.77.3e-2697157259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
               dDgy+WrKYG K++  +++pr+YYrCt++   gC ++k+v++s+edp ++++tY+g+Hn++
  OIS99656  97 DDGYSWRKYGMKDILRANHPRAYYRCTHRntqGCLATKQVQKSDEDPLFFDVTYKGKHNCK 157
               8***************************98889**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MEFANRLKSK IDPLASPEEC DLLLEKILSS LDKSLSILNL KAVNTIRDPF CCSKNEGSDL  60
DYYSRDQGKN MVSKKRKLLQ QWSKQVRISG IEGPNYDDGY SWRKYGMKDI LRANHPRAYY  120
RCTHRNTQGC LATKQVQKSD EDPLFFDVTY KGKHNCKASQ SVDISQENQK ANYNKNQNVG  180
NQKVENLNII KEEDFPFTPL KSESENSQFF ANSMEPFTSP IASESLYLSL LPTQEEEFEL  240
DQILQSSKLS HIEFSTTPTS VINSPFCGYL DLSVDDQVDN IDLSLMIDVS EFFT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.22e-37WRKY family protein