PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS99615
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Dof
Protein Properties Length: 314aa    MW: 34373.7 Da    PI: 8.5676
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS99615genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.96e-4040101263
    zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 
               k++al+cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrn+PvGgg+rknkksss
  OIS99615  40 KDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTAGGSLRNIPVGGGSRKNKKSSS 101
               7899******************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MDTAQWPQEI VVKPMEEIIQ NTNGSSKPNS CVERKVRPQK DQALNCPRCN STNTKFCYYN  60
NYSLSQPRYF CKTCRRYWTA GGSLRNIPVG GGSRKNKKSS SNSSSYSNHV NNPLKKLPDL  120
INQPSHNHDQ NPSKIHIEGS QDLNLGFSSD FKTITELIQV PNYDGNNKDN NSPSISPLPP  180
PPPSSSSSAS SSSQLSALEL INGITSRGRN NNLFMSMANI STDPNSVYNN SSGFSLPSLN  240
FSLDHGLGNA AYGNNIQETN TSGRFLFPFV GLKQISTTNT TNDGGNENNR DHHQPAEEST  300
NGFWNGMLGG GGSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64620.13e-46Dof family protein