PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS99437
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 322aa    MW: 36017.8 Da    PI: 6.8656
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS99437genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY992.9e-31163221259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               +D ++WrKYGqK++kgs++pr+YY+C+++ gC ++k+ver+++dp++++itY+ eHnh+
  OIS99437 163 SDMWSWRKYGQKPIKGSPYPRGYYKCSTSkGCLARKQVERNRSDPNMFIITYTAEHNHP 221
               79************************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MEEDWDLHAV VRSCAAANST TTTTTATTTS SSGSATISSC NFQPRVDDSN FQDLYFDPRF  60
TTQNTAFEEL HELCKPFFNE SPLQKSPLIS PQRLLQDLPL QQITQRQQQQ QQFNQINTKL  120
IQPIKRPLSS VNGATLHAQS PRSKRRKNQM KKVCQVAADA LSSDMWSWRK YGQKPIKGSP  180
YPRGYYKCST SKGCLARKQV ERNRSDPNMF IITYTAEHNH PMPTHRNSLA GISRHNKETN  240
SNKTTSSSPV SSPVTNSPAP ENQESSRDEK EDIFEDENDD FFEGLEELES PAAGDSLTEN  300
FPGTLQFPWM TNNAATTAAG GG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.18e-59WRKY family protein