PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS99429
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 240aa    MW: 26879.1 Da    PI: 4.7241
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS99429genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-18132182255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               +y+GVr ++ +g+++AeIrdp +ng  +r++lg++ tae+Aa a+++a+ +++g
  OIS99429 132 HYRGVRLRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEDAAFAYDKAAFRMRG 182
               8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MYANCEVDND YAVLESIRLH LLEDWEAPLT SSDNSTASDL SRSNSIESNM FPNCLPNEFD  60
YTADMFYNDI FNEGIVGYGF EPASEFTLHT IKLEPEMTVQ SPEIWNLPEF VAPPETAAEV  120
KLEPPAPPKA KHYRGVRLRP WGKFAAEIRD PAKNGARVWL GTYETAEDAA FAYDKAAFRM  180
RGSRALLNFP LRINSGEPDP IRVGSKRSSM SPEYSSSSSS SSPPMKRRKK VAQETELVAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.14e-45ERF family protein