PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIS99267 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 261aa MW: 27846.1 Da PI: 10.0606 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.2 | 6.5e-21 | 29 | 79 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr ++ +gr++AeIrdp gk+ r++lg+f+taeeAaka++aa+++++g+ OIS99267 29 HYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAAKAYDAAAREFRGA 79 6********.**********8...557*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MAPKQQGGAV AVAVTAAVGK VNGISKEVHY RGVRKRPWGR YAAEIRDPGK KSRVWLGTFD 60 TAEEAAKAYD AAAREFRGAK AKTNFPPPEE EILKIAQNNL GVKMNKNVND NNNRSPSQSS 120 TVESSSGDRL SPAVMVDSSP LDLSLGVKFP FQNHQFRTSP ISGGFSGCGF TGATPAVNHH 180 MYYLEALARA GVINLEKHQQ RKTVDFLGGK GGHGGSSGGS GSGTQSESDS SSVIDFMRND 240 VKPTTRTGLN LDLNFPPPEN V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 8e-27 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIS99267 |