PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS99126
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 219aa    MW: 24114 Da    PI: 8.4927
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS99126genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.3e-203078355
       AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              ++GVr ++ +gr++AeIrd ++    ++r++lg+f++aeeAaka++aa++ l+g
  OIS99126 30 FRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEEAAKAYDAAARTLRG 78
              8*******.**********883....5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MRRGRATAAA KQAAEAAPAA GSGGLKEIRF RGVRKRPWGR FAAEIRDPWK KTRVWLGTFD  60
SAEEAAKAYD AAARTLRGPK AKTNFPLPPY SHFNQTVNPN DPFIDPRLYS QENHPIVIQR  120
PTSSSMSSTV ESFSGPRPPP RQQTAVLPSR KHPRSPPVVP DDCRSDCDSS SSVVEDGDCD  180
NENDNIVSSV FRKPLPFDLN FPPPMDADSD DLHCTALCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.11e-33ERF family protein