PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS99096
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 235aa    MW: 25995.4 Da    PI: 6.0756
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS99096genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.3e-1180127454
               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
               ++  rE+ RR+++N++f eL  ll +    + +K +K++iL  A++ + +L
  OIS99096  80 SKACREKLRREKLNDKFMELGALLEPG---RTPKTDKSAILVDAIRMVTQL 127
               6789**********************9...8***************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MVSPETTNWL YDYNFEDITV SVDPNFSNST SGFSWSMQPF NGSTTNISVD IDNSIGESDC  60
LKESGSKKRA RAESCTSSSS KACREKLRRE KLNDKFMELG ALLEPGRTPK TDKSAILVDA  120
IRMVTQLRGE AEKLNDSNLN LQEKIKELKA EKNELRDEKQ RLKAEKEKLE QQLKTINAQP  180
GFFPPAIPAA FAAPGQAAGS KLVPIISYPG VAMWQFMPPA AVDTSQDHVL RPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-84bHLH family protein