PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIS99026 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 236aa MW: 26421.9 Da PI: 8.453 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.6 | 1.8e-19 | 104 | 154 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp +ng +r++lg++ t eeAa a+++a+ +++g OIS99026 104 HYRGVRRRP-WGKFAAEIRDPAKNG--ARVWLGTYETDEEAAIAYDKAAYRMRG 154 7********.***********9987..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MNQPIYTELL PANLLGDFPV YRRNSSFSRL IPCLTETWGE LPLKVDDSED MVIYTLLKDA 60 LNVGWSPFNF TAGEVKSELR EEEPVVCPAE TTAAPATESP RGRHYRGVRR RPWGKFAAEI 120 RDPAKNGARV WLGTYETDEE AAIAYDKAAY RMRGSKAHLN FPHRIGLNEP EPVRVTAKRR 180 ASPEPASSSE NSSVKRRRKT VAAEKSEAVE VESKSNVLQV GCQVELLTRG HQLLVS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 178 | 199 | KRRASPEPASSSENSSVKRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17500.1 | 7e-48 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIS99026 |