PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS98752

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 379aa MW: 43019.3 Da PI: 6.6384

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS98752	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.9	4.2e-32	82	135	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH rF++ave+LGG+++AtPk +l+lm++kgL+++hvkSHLQ+YR+ OIS98752 82 PRLRWTPELHLRFIHAVERLGGQDRATPKLVLQLMNIKGLSIAHVKSHLQMYRS 135 8****************************************************7 PP
2	Myb_DNA-binding	54.9	2e-17	83	134	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++++++av++lGg t+k++ + m+ kg++ ++ks++q+y+ OIS98752 83 RLRWTPELHLRFIHAVERLGGQdraTPKLVLQLMNiKGLSIAHVKSHLQMYR 134 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MKRGSSAEDS KSSPKNQIEF EEEEEEEEEE EEEEEEDDLE TEENSKLPKG TRTSSSNSTV 60 EENGKKSTNS GGVRQYVRSK TPRLRWTPEL HLRFIHAVER LGGQDRATPK LVLQLMNIKG 120 LSIAHVKSHL QMYRSKKTDD PNQISTDGRF LLENGDHHIF NLSHFPRLQG TFNQASSSSL 180 RYDDSTWSRQ VNSSLYNPYN INIGSASSLS TRHGFSSHGH SHGPLFPWNK TLQIEKNPQH 240 FHNQRFWSTQ IGTSSTKQNL LMTLPIDRDR DGGIREQEIM KTQMRNNNSL SSRGKGWTTE 300 AGTTTTCAPN KRKIQDSEIN LDLNLSLKIT REDDDHQKRL KAEQVGNLLS LSLFSSSTTS 360 MDDQQNQGAR MASTLDLTL

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MKRGSSAEDS KSSPKNQIEF EEEEEEEEEE EEEEEEDDLE TEENSKLPKG TRTSSSNSTV  60
EENGKKSTNS GGVRQYVRSK TPRLRWTPEL HLRFIHAVER LGGQDRATPK LVLQLMNIKG  120
LSIAHVKSHL QMYRSKKTDD PNQISTDGRF LLENGDHHIF NLSHFPRLQG TFNQASSSSL  180
RYDDSTWSRQ VNSSLYNPYN INIGSASSLS TRHGFSSHGH SHGPLFPWNK TLQIEKNPQH  240
FHNQRFWSTQ IGTSSTKQNL LMTLPIDRDR DGGIREQEIM KTQMRNNNSL SSRGKGWTTE  300
AGTTTTCAPN KRKIQDSEIN LDLNLSLKIT REDDDHQKRL KAEQVGNLLS LSLFSSSTTS  360
MDDQQNQGAR MASTLDLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	3e-46	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIS98752