PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIS98704 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 218aa MW: 24005.9 Da PI: 5.6922 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.8 | 4.9e-17 | 58 | 108 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + + +Wv+e+r+p +k+ r++lg++ tae+Aa+a++ a+ +l+g OIS98704 58 PVYRGVRKRN-SDKWVSEVREP---NKKSRIWLGTYPTAEMAARAHDVAAIALRG 108 68*****888.7******9998...347*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MDIFRSYYSD SLTESSSLAE NSSSPCNRAI LSDEEVLLAS NNPKKRAGRK KFQETRHPVY 60 RGVRKRNSDK WVSEVREPNK KSRIWLGTYP TAEMAARAHD VAAIALRGRS ACLNFADSVS 120 KLPIPASTDA KDIQRAAAEA AEAFRPSESE AVSGESCGGT THETPESNKL FMDEEALFCM 180 PGLLASMAEG LMLPPPHYIE VGDYVEAAAD MHLWSYTI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25490.1 | 8e-66 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIS98704 |