PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIS98703 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 214aa MW: 23755.9 Da PI: 7.8877 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.4 | 1.5e-17 | 58 | 108 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ + +Wv+e+r p +k+ r++lg++ tae+Aa+a++ a+ +l+g OIS98703 58 PVYRGVRRRN-SDKWVCEVRQP---NKKSRIWLGTYHTAEMAARAHDVAAIALRG 108 68*****888.8******8887...347*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 214 aa Download sequence |
MDIIRSYYSD SLTESSSLSD SSSSPCNRAN LSDVEVLLAS NNPKKRAGRK KFRETRHPVY 60 RGVRRRNSDK WVCEVRQPNK KSRIWLGTYH TAEMAARAHD VAAIALRGRS ACLNFADSVW 120 KLPIPASSEA KDIQRAAAEA AEAFRPSEPE AVSGKSCAVT PESNKFFMDE EALFCMPGLL 180 ANMAEGLMLP PPHYVEAGDY VEAAADMHLW SYII |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G25490.1 | 6e-68 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIS98703 |