PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS98663

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

CAMTA

Protein Properties

Length: 972aa MW: 108851 Da PI: 8.0892

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS98663	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	177.3	1.9e-55	20	135	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlL 102 +e ++rwl++ ei++iL n++k+ lt e++ rp+ gsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLK g+v+vl+cyY+h+e+n++fqrr+yw+L OIS98663 20 QEtQHRWLRPAEICEILRNHHKFYLTPEPPVRPPGGSLFLFDRKVLRYFRKDGHQWRKKKDGKTVKEAHEKLKAGSVDVLHCYYTHGENNENFQRRSYWML 120 4559*********************************************************************************************** PP CG-1 103 eeelekivlvhylev 117 ee+le+ivlvhy+ev OIS98663 121 EEKLEHIVLVHYREV 135 **********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 972 aa Download sequence
MADTRRYLSD QPLDLEHILQ ETQHRWLRPA EICEILRNHH KFYLTPEPPV RPPGGSLFLF 60 DRKVLRYFRK DGHQWRKKKD GKTVKEAHEK LKAGSVDVLH CYYTHGENNE NFQRRSYWML 120 EEKLEHIVLV HYREVIEGYR VGASRLQPIH PGQLLENPSS SPCFVSGLIV QESHTSSPSS 180 VDWKEQALSS ELYTGDSKGN EVDPLLVPAS GHFLPITSSF STEKPTELVE FSRDSFQLNP 240 QFGSFVSIDA QSSDRNLNVT LQKKFYSGYL NVADLLSTVS SKLTYARLDA GRSVKDVANS 300 RNRLTITSGE VLEENIHLAP AQIQNISSSQ TVVTPDAAVQ SSSLECRLNS DEAGSLKKLD 360 SFGRWMDREI GVDGNESLLA SDSGNYWNTL DNGDKEVSSL SRHMQLDKNS VGPSLSQEQL 420 FSISDFAPDW AYSGVETKVL IIGTFLGHGK HPTSQKWSCM FGEVEVSAEL LTQSIIRCEV 480 PSHSPGRVPF YVTCSNRLAC SEVREFEYRE KPSELALALR PSDEVRLQVR LAKLLYSGLN 540 KKFLDCSSRE CERCKLKTLL CSLKCKIGNA SESLEDLLAI IEGNHINFRD TLIQNFMKDK 600 LYEWLVSRAH EEDKGPNILD DEGQGVIHLV AALGYEWGLA LLTAAGINPN FRDARGRTAL 660 HWAAHYGRED MVIALVKLGV AACAVDDPTA AFPGGQTAAD LASSGGHKGI AGYLAESDLT 720 AHLQSLAINN NALDSICAGL EAEKAFESAA QEVVPLNGTI HDDISLKGSL ASVRKSAHAA 780 ALIQAAFRAR SFRQRQLRES RNDVSEASVD LVALGSLNKV QKVNHSEDYL HPAAIQIQQI 840 YRGWKGRREF LKIRSRIVKI QAHVRGHQVR KQYKKFVWSV SIVEKAILRW RRKKPGLRGF 900 QPKKTSQKEL PEFEKNDEYE YLSIGRKQKF AGVQKALARV QSMVRHPEAR DQYMRLVAKL 960 DSSKLDDGGS SI

Sequence ? help Back to Top

Protein Sequence Length: 972 aa Download sequence

MADTRRYLSD QPLDLEHILQ ETQHRWLRPA EICEILRNHH KFYLTPEPPV RPPGGSLFLF  60
DRKVLRYFRK DGHQWRKKKD GKTVKEAHEK LKAGSVDVLH CYYTHGENNE NFQRRSYWML  120
EEKLEHIVLV HYREVIEGYR VGASRLQPIH PGQLLENPSS SPCFVSGLIV QESHTSSPSS  180
VDWKEQALSS ELYTGDSKGN EVDPLLVPAS GHFLPITSSF STEKPTELVE FSRDSFQLNP  240
QFGSFVSIDA QSSDRNLNVT LQKKFYSGYL NVADLLSTVS SKLTYARLDA GRSVKDVANS  300
RNRLTITSGE VLEENIHLAP AQIQNISSSQ TVVTPDAAVQ SSSLECRLNS DEAGSLKKLD  360
SFGRWMDREI GVDGNESLLA SDSGNYWNTL DNGDKEVSSL SRHMQLDKNS VGPSLSQEQL  420
FSISDFAPDW AYSGVETKVL IIGTFLGHGK HPTSQKWSCM FGEVEVSAEL LTQSIIRCEV  480
PSHSPGRVPF YVTCSNRLAC SEVREFEYRE KPSELALALR PSDEVRLQVR LAKLLYSGLN  540
KKFLDCSSRE CERCKLKTLL CSLKCKIGNA SESLEDLLAI IEGNHINFRD TLIQNFMKDK  600
LYEWLVSRAH EEDKGPNILD DEGQGVIHLV AALGYEWGLA LLTAAGINPN FRDARGRTAL  660
HWAAHYGRED MVIALVKLGV AACAVDDPTA AFPGGQTAAD LASSGGHKGI AGYLAESDLT  720
AHLQSLAINN NALDSICAGL EAEKAFESAA QEVVPLNGTI HDDISLKGSL ASVRKSAHAA  780
ALIQAAFRAR SFRQRQLRES RNDVSEASVD LVALGSLNKV QKVNHSEDYL HPAAIQIQQI  840
YRGWKGRREF LKIRSRIVKI QAHVRGHQVR KQYKKFVWSV SIVEKAILRW RRKKPGLRGF  900
QPKKTSQKEL PEFEKNDEYE YLSIGRKQKF AGVQKALARV QSMVRHPEAR DQYMRLVAKL  960
DSSKLDDGGS SI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	OIS98663