PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS98555
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ARR-B
Protein Properties Length: 663aa    MW: 73325.3 Da    PI: 6.6219
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS98555genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like91.86e-29198251155
   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
               kpr++W+ eLH++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl
  OIS98555 198 KPRVVWSVELHQQFVQAVHQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 251
               79*******************.********************************8 PP
2Myb_DNA-binding44.92.8e-14200250148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ e+++++v+av+qlG +   +k+I + m+  g+t++++ s++qky+
         OIS98555 200 RVVWSVELHQQFVQAVHQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 250
                      678***********************************************7 PP
3Response_reg82.61.2e-27181261109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl+vdD+p+ +++l+++l++ +y +v+ +  +e al ll+ek+  +D+++ D+ mp+mdG++ll++i  e  +lp+i+++a ++++ + + +  Ga 
      OIS98555  18 VLVVDDDPTCLRILEKMLRNCHY-QVTKCNRAEVALSLLREKKngFDIVISDVHMPDMDGFKLLEHIGLEM-DLPVIMMSADDSKDVVMKGVTHGAY 112
                   89*********************.***************999999**********************6654.8************************ PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                   d+l Kp+ +e+l +
      OIS98555 113 DYLIKPVRIEALKN 126
                   **********9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 663 aa     Download sequence    
MSVPSSTVSD QFPVGLRVLV VDDDPTCLRI LEKMLRNCHY QVTKCNRAEV ALSLLREKKN  60
GFDIVISDVH MPDMDGFKLL EHIGLEMDLP VIMMSADDSK DVVMKGVTHG AYDYLIKPVR  120
IEALKNIWQH VVRKKKHERK DNNYDQSGSV EEGDRQQKPP EDADYSSSAN EGNWRNSKKR  180
KEEEEEAEER DDTSTLKKPR VVWSVELHQQ FVQAVHQLGI DKAVPKKILE LMNVPGLTRE  240
NVASHLQKYR LYLRRLSGVS QHQSSLNNSF MGCPDATFGT ISPLNGLDLQ AIAAAGQIPA  300
QSLATLQAAA LGRSAATKSA ISMPLVDQRN LFSFENSKLR FPEGQQQLNN SNKQIDLLHG  360
IPTTMEPKQL ANLHHPSQSF VGMNTQVNSM AQHNNSLLMR MSQSQPRAQM LNGANNGHQV  420
SRLPLSMQQP LSPEGIPGTV PAQSGIVDNA RGSVYNPVSQ ASSMVDFSLN QSKELQSYNF  480
SLGSNNSGMS TLTNRGMLQE EMNSDIKGSR GFPSNYDMFN ELHQQKSQNW GLQNVGSTFD  540
ASHHPSIQGT QGVSSQLLLQ QGISSAHHSG QNRNAPIGKP MYSNADESGH VNPMGGPQLN  600
SLGGNMLAVK AERFSDLDYH STIYHEQLGQ EDLMSAFLKQ QGNVGPVETE FGFDGYTLDN  660
LPV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-171ARR-B family protein