PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS98322
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WOX
Protein Properties Length: 244aa    MW: 27478.6 Da    PI: 5.1696
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS98322genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.38.3e-2191151257
               T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
  Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
               r+R+t+t+ ql++Le+ F + n +ps++++++++ +l    +++e++V++WFqNrRa+ k+
  OIS98322  91 RQRWTPTPVQLQILERIFDQgNGTPSKQKIKDITFELsqhgQISETNVYNWFQNRRARSKR 151
               89*****************99**************************************97 PP

2Wus_type_Homeobox100.81e-3291153365
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        r+RWtPtp Q++iLe+++++G  tP+k++i++it eL+++G+i+++NV++WFQNr+aR+++kq
           OIS98322  91 RQRWTPTPVQLQILERIFDQGNGTPSKQKIKDITFELSQHGQISETNVYNWFQNRRARSKRKQ 153
                        79***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MEWENQQQQP PQTAEDMNGA AVGGGGMFVK VMTDEQMEVL RKQIAVYAVI CEQLVDLHKS  60
MASQHDLAGT RLGNLYCDPL ITSAGHRISG RQRWTPTPVQ LQILERIFDQ GNGTPSKQKI  120
KDITFELSQH GQISETNVYN WFQNRRARSK RKQQGGGAMN TVESEVETEV ESPNEKKTKP  180
EDLQSSHIPT SRAEEGSSNP AGSFDQLSFY AMSNPRMDQV IEKMEEAGSY HPYLHAENYD  240
MISQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1145153RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.16e-78WOX family protein