PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIS98322 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WOX | ||||||||
Protein Properties | Length: 244aa MW: 27478.6 Da PI: 5.1696 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.3 | 8.3e-21 | 91 | 151 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + n +ps++++++++ +l +++e++V++WFqNrRa+ k+ OIS98322 91 RQRWTPTPVQLQILERIFDQgNGTPSKQKIKDITFELsqhgQISETNVYNWFQNRRARSKR 151 89*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 100.8 | 1e-32 | 91 | 153 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 r+RWtPtp Q++iLe+++++G tP+k++i++it eL+++G+i+++NV++WFQNr+aR+++kq OIS98322 91 RQRWTPTPVQLQILERIFDQGNGTPSKQKIKDITFELSQHGQISETNVYNWFQNRRARSKRKQ 153 79***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MEWENQQQQP PQTAEDMNGA AVGGGGMFVK VMTDEQMEVL RKQIAVYAVI CEQLVDLHKS 60 MASQHDLAGT RLGNLYCDPL ITSAGHRISG RQRWTPTPVQ LQILERIFDQ GNGTPSKQKI 120 KDITFELSQH GQISETNVYN WFQNRRARSK RKQQGGGAMN TVESEVETEV ESPNEKKTKP 180 EDLQSSHIPT SRAEEGSSNP AGSFDQLSFY AMSNPRMDQV IEKMEEAGSY HPYLHAENYD 240 MISQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 145 | 153 | RRARSKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 6e-78 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | OIS98322 |