PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS98205

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 389aa MW: 44130.9 Da PI: 5.9751

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS98205	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99	3.3e-31	208	262	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt+ LH+rFve+v++LGG++kAtPk+i++lm+ +gLt+ hvkSHLQkYR+ OIS98205 208 KTRIRWTQHLHDRFVECVNRLGGADKATPKAIVKLMDSEGLTIFHVKSHLQKYRS 262 68****************************************************7 PP
2	Myb_DNA-binding	45.2	2.2e-14	212	261	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT+ +++++v++v++lGg t+k+I + m +g+t ++ks++qky+ OIS98205 212 RWTQHLHDRFVECVNRLGGAdkaTPKAIVKLMDsEGLTIFHVKSHLQKYR 261 9***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MSIQRAEQTH AYHNSEFATD YNLEFQQNID QQKSSSCLEF CFQPGTSAEN CCQQISDSSS 60 GTIISRIASP PSAFFTTERL IQYEYQDNSC QLSKYNDAQL PSYPQRDFPK ISMPTFIRSQ 120 LSNSQPLGPE EAYGNPFSNL SEKERIVFLK SKLLEEFDSS NKQPSMPVFH GNQDYGQLSN 180 NFCGFNLVQS GSPSANNVNN SGGSLSNKTR IRWTQHLHDR FVECVNRLGG ADKATPKAIV 240 KLMDSEGLTI FHVKSHLQKY RSAKYIPESA EGKSEKMDSP NNVTQINSKT GMQIKEALNI 300 QLEVQRRLHE QLEIQHKLQM RIEEQGEQLK KMFDQQQKTS RSLLETRNSS ITSPVDSFNP 360 HEEEDEVHVA DSFEFSSKIS YNDMATASI

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MSIQRAEQTH AYHNSEFATD YNLEFQQNID QQKSSSCLEF CFQPGTSAEN CCQQISDSSS  60
GTIISRIASP PSAFFTTERL IQYEYQDNSC QLSKYNDAQL PSYPQRDFPK ISMPTFIRSQ  120
LSNSQPLGPE EAYGNPFSNL SEKERIVFLK SKLLEEFDSS NKQPSMPVFH GNQDYGQLSN  180
NFCGFNLVQS GSPSANNVNN SGGSLSNKTR IRWTQHLHDR FVECVNRLGG ADKATPKAIV  240
KLMDSEGLTI FHVKSHLQKY RSAKYIPESA EGKSEKMDSP NNVTQINSKT GMQIKEALNI  300
QLEVQRRLHE QLEIQHKLQM RIEEQGEQLK KMFDQQQKTS RSLLETRNSS ITSPVDSFNP  360
HEEEDEVHVA DSFEFSSKIS YNDMATASI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	2e-66	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIS98205