PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIS98171 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ARR-B | ||||||||
Protein Properties | Length: 566aa MW: 62722.9 Da PI: 6.918 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 86.3 | 3.1e-27 | 321 | 374 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k +++WtpeLH++Fv+aveqL G+++A+P++ilelmkv+gLt+++v+SHLQk+R+ OIS98171 321 KMKVDWTPELHKKFVKAVEQL-GIDQAIPSRILELMKVEGLTRHNVASHLQKFRM 374 5689*****************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 43.4 | 7.6e-14 | 324 | 373 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++v+av+qlG + +++I + m +g+t+ ++ s++qk++ OIS98171 324 VDWTPELHKKFVKAVEQLGIDqaIPSRILELMKvEGLTRHNVASHLQKFR 373 57**********************************************97 PP | |||||||
3 | Response_reg | 31.6 | 8.6e-12 | 20 | 126 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEH.HHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdG.lellkeireeepklpiivvtahgeeedalealkaGa 94 vl+ d++ + ++ +r+ le+ +y +v ++ d eal + k ++l ++ + + dG l++l+ ++ +lp i+v++ + +++ +++ Ga OIS98171 20 VLLLDKDCNSASEMRSRLEQMEY-IVYVFCDENEALSAISSKSevFHLAIVEVTAGNRDGgLKFLT---SAR-DLPTIMVSGIHSISTMMKCIAHGA 111 79999******************.***************777778************665155554...444.699*****9999************ PP SEEEESS--HHHHHH CS Response_reg 95 kdflsKpfdpeelvk 109 +fl Kp + ++l++ OIS98171 112 VEFLQKPLSDDKLRN 126 ************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 566 aa Download sequence |
MVCTENELLG WKDFPKGLKV LLLDKDCNSA SEMRSRLEQM EYIVYVFCDE NEALSAISSK 60 SEVFHLAIVE VTAGNRDGGL KFLTSARDLP TIMVSGIHSI STMMKCIAHG AVEFLQKPLS 120 DDKLRNIWQH VVHKAFNSGG KNVSESLKPV KESLLSMLEL QPVKSEVKNE ADNENSNGAE 180 PLTSVVENQK ELPPYCDKYP APSTPQQKQG VRSVDDGDFQ DHTILSTEQD SGVNEGDTKS 240 VETTCCDSVA ETTVLADSPG RLGEAITKEE HDFAADQKME DHIATCSRSN DCTGNGSTRS 300 ADSSKASGLH SSSGTKANKK KMKVDWTPEL HKKFVKAVEQ LGIDQAIPSR ILELMKVEGL 360 TRHNVASHLQ KFRMQRRQIL PKEDEKRWPR PQPRDSVQRS YYPHKPVMAF PTYHSNHAPA 420 SGQFYPAWVP PGNYPNGARI WGSPYYPGWR PSETWHWTPH PGLCADVWGC PVTPPSFGSC 480 PPYPQNASGL HKAVGIQNRY SILEKSLDLQ PAEEVIDKVV KEAINKPWLP LPLGLKPPST 540 ESVLDALSKQ GISTVPPRIT GSFRPH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18020.3 | 1e-132 | ARR-B family protein |
Link Out ? help Back to Top | |
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Ensembl | OIS98171 |