PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS97972
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 313aa    MW: 35333.8 Da    PI: 7.4967
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS97972genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3103.98.5e-3362167199
               EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
               f+k ltpsdv+k++rlv+pk++ae+h       + + e+++ l +ede g+ W+++++y+++s++yvltkGW++Fvk+++L++gDfv+F++++ ++ + ++
  OIS97972  62 FEKPLTPSDVGKLNRLVIPKQHAEKHfpingtqNDSGEKGFLLNFEDELGKLWTFRYSYWNSSQSYVLTKGWSRFVKEKKLDAGDFVLFERHRLDGDRTFI 162
               99***************************999844445899*************************************************75448888999 PP

               EEE-S CS
        B3  95 kvfrk 99 
               +++r+
  OIS97972 163 GWRRR 167
               99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MSINHCSSHH TEPLWCKTKQ HYIMESSRKS SSPNYKNQTT PTSLCPNNNQ LEENEIPKEH  60
LFEKPLTPSD VGKLNRLVIP KQHAEKHFPI NGTQNDSGEK GFLLNFEDEL GKLWTFRYSY  120
WNSSQSYVLT KGWSRFVKEK KLDAGDFVLF ERHRLDGDRT FIGWRRRNAA AGATVSEQER  180
GVAPPGGGGG GWGQVYYGGS GHPYPSAGVP YQPDCLHAER RVMHNQTAAN GNNTRRQVRL  240
FGVNLAEFEV DESSWSEPST SDGSSTPSHH QQSHEYQGQV GQPYYQYQVH CSNPPAPASS  300
YAKNNHHNNM DVD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36080.12e-63B3 family protein