PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS97928
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 328aa    MW: 36724.8 Da    PI: 4.5405
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS97928genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.4e-18112159253
       AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkl 53 
               +y+GVr++k +g+W+AeIrd +     + +r++lg++ taeeA  a++  r+++
  OIS97928 112 KYRGVRQRK-WGKWAAEIRDpF-----KgRRVWLGTYNTAEEASLAYETKRLEF 159
               8*******9.**********55.....45*******************999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MFEPQKQTQK SKNRVEPGQP MRKIRIVCND PDATDSSDDE RVNDIKPKLK RFVREINLPI  60
GNISSKKVKV KIPVETTESS CQDSNNGEKN PKKKRVLAKT LSSNQQRLSP GKYRGVRQRK  120
WGKWAAEIRD PFKGRRVWLG TYNTAEEASL AYETKRLEFD SMAKNNNNSS SNVSEKSSNN  180
EENSAESLVS HTSHTSPASV LEMDSLTSNS EVNDIKHDEK AKVELGLMED SLSLAEIGAG  240
IEFDMEMDLF FAGSDDFGQN LDDFVVNDFE DLPIYGLEGD EQLPTGLPDF DFDFDFDGYN  300
ESCAWMDEAT AAPLMNGTTT PLNIALCP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.11e-29ERF family protein