PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIS97882 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ARR-B | ||||||||
Protein Properties | Length: 542aa MW: 60636.8 Da PI: 5.6826 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 81 | 1.3e-25 | 196 | 249 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++Wt +LH++Fv+av+q+ G +kA Pk+il+lm+v+ Lt+e+v+SHLQkYRl OIS97882 196 KARVVWTVDLHQKFVKAVNQI-GFDKAGPKKILDLMGVPWLTRENVASHLQKYRL 249 68*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 41.5 | 3.1e-13 | 198 | 248 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r WT ++++++v+av+q G + +k+I mg +t++++ s++qky+ OIS97882 198 RVVWTVDLHQKFVKAVNQIGFDkaGPKKILDLMGvPWLTRENVASHLQKYR 248 678***********************************************7 PP | |||||||
3 | Response_reg | 80.5 | 5.4e-27 | 25 | 133 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+p+ +++l+++l+k y ev++ ++eal+ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ Ga OIS97882 25 VLVVDDDPTWLKILEKMLKKCSY-EVTTSGLAREALNLLRERKdgFDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGAC 119 89*********************.***************999999**********************6644.8************************ PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ ++el++ OIS97882 120 DYLLKPIRMKELRN 133 ***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 542 aa Download sequence |
MMENSKTTAG FSSPRSDNFP AGLRVLVVDD DPTWLKILEK MLKKCSYEVT TSGLAREALN 60 LLRERKDGFD IVISDVNMPD MDGFKLLEHV GLEMDLPVIM MSVDGETSRV MKGVQHGACD 120 YLLKPIRMKE LRNIWQHVLR KRMHEARDIG NHEMDQFDEV WMLNGTELLS GKKRKDFDNE 180 KETSDSRCVD SSSMKKARVV WTVDLHQKFV KAVNQIGFDK AGPKKILDLM GVPWLTRENV 240 ASHLQKYRLY LTRLQKENEV KASFCGMKHP NVSSKENSPQ NPVDVCTDVI NDKCSGVSGD 300 EAIVQNGKAN IYESKVKGVV SMPVTEPRSV VGDNIGSKTS LSDPFGLINT DVKSLNCFTG 360 EAPQPQYKQD FKPRFPSENG LSNQPLPGMD CTQPTCSLNL VPSHEVRDRV SSKENKPSFF 420 KSISGLGKLS ALEAIQPVSH QINFHALEQI PTTTWSMTSQ NVDQNLVNAL QSTPGNLGED 480 ASIQGECFPA YNGLWNIQQF DYNDPQPISG GPTCLYDTLR FDYEYPNDSL EGVVLDQGLF 540 IV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67710.1 | 1e-115 | ARR-B family protein |
Link Out ? help Back to Top | |
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Ensembl | OIS97882 |