PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS97704
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 264aa    MW: 30047.4 Da    PI: 5.9212
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS97704genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.32.9e-163482355
       AP2  3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
              + GVr+++ +g+WvAeI+d       +  r +lg++ taeeAa a+++a+  l+g
  OIS97704 34 FVGVRQRH-SGKWVAEIKDtT-----KeIRMWLGTYETAEEAAHAYDQAAVLLRG 82
              78*****9.7*********43.....35**********************98887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MEINFQKQQQ TEEISKNKLA KFKGKRRSKS RNNFVGVRQR HSGKWVAEIK DTTKEIRMWL  60
GTYETAEEAA HAYDQAAVLL RGSNTRTNFV TRVSQDSPLA SRIRNLLKSK KIAKQKCLDY  120
TVVSTSSNSV QSSLNISSSS SLIISNCDDS ISSENTHTEL SLDHEIKEES QQFHNTYIPD  180
IDMGASAYSS FSWGFGEGFE FAQELLDIPK NVISGEMGLT EYEIMKEERQ ISASIYAVNG  240
VQDYMESVHD PYESLWDHPL SNYW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-23ERF family protein