PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS97647
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 225aa    MW: 26041.4 Da    PI: 9.4259
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS97647genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.21.7e-14994198
              EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
        B3  1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
              ffk       +k+g + +p  f+ ++ +g k  + +  +  + g +W vk+  ++++    +++GW eF+++++L+ gD++vF+++g++ef   v++f 
  OIS97647  9 FFKPI--LPGFKNGGIKIPTGFL-KYlKGCK-IN-EHAILKRGGTKWPVKV--NGRQ----FEAGWAEFAEEHDLQLGDMLVFRHEGNMEF--DVSIFG 94
              66666..67899***********.6654443.32.5667789*********..7777....9***********************999999..888886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
KVPPNKPHFF KPILPGFKNG GIKIPTGFLK YLKGCKINEH AILKRGGTKW PVKVNGRQFE  60
AGWAEFAEEH DLQLGDMLVF RHEGNMEFDV SIFGSSHCEK EYAAYMQEDE EEETPRNLKI  120
KLYINLMMLF FKLNGSFILF FCIIFLTNAT EKPKANIKTS GKAFPNVEAA SKEIHISHSH  180
LICTIRPYCL SRDFLLIPKQ FALDNRLNNR KCTIIMRDER RSWTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.13e-30B3 family protein