PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS97645
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 452aa    MW: 51375.1 Da    PI: 9.275
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS97645genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.79.9e-1417931097
              HHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
        B3 10 vlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
               +k+  l +p  f+ ++ + + + +++  +  + +++W vk+  ++++    l++GW++F+++++L+ gD++vF ++g++ef   v+vf
  OIS97645 17 GFKN-GLKIPLGFL-KYlK-D-HDHIEHAILRRGSKKWLVKV--NGRR----LEEGWEKFAEEHDLQLGDMLVFGHEGDMEF--EVSVF 93
              4555.5*******9.7733.3.36678899999*********..8888....*************************99999..77776 PP
2B351.91.4e-16179267598
               -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
        B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
               +++++  +++++ +pk fa e+g+++++  t++++d + rsWe++l    ++g++++++ W++F+ an LkegD ++F+  + +++++ +k+++
  OIS97645 179 TVKPSCISKCLMHVPKLFACENGLSNRK-CTIVIRD-EQRSWEFRL--YSCGGSTFIGGEWRKFCAANFLKEGDHIMFEIFS-KGEKPILKFCD 267
               56789999**************999765.5999999.779******..999999*************************655.88889999997 PP
3B348.21.9e-15349431590
               -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
        B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
               +++++ l+ g l +pk+fa ++g+k++++  l+++de+  sW+++l  + ++ ++++++G ++F  +n LkegD ++F+++  s++
  OIS97645 349 TIRPYCLTYGFLNVPKHFACANGLKPNKKCILIIRDERQGSWTLRL--SVCKTQVYIGDGLRKFIADNCLKEGDRIMFEVVT-SGE 431
               56789999999***********************************..999999*************************765.444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    
MKIPPKKPHF FKPIMPGFKN GLKIPLGFLK YLKDHDHIEH AILRRGSKKW LVKVNGRRLE  60
EGWEKFAEEH DLQLGDMLVF GHEGDMEFEV SVFHSNQCDR EYEEEQKVHN VEETSKKFEF  120
KDLRGNASLR LEGKTTNLHA KSISTEEKPN PNIMSSLKVF PNVEATKDVP LGRPHLITTV  180
KPSCISKCLM HVPKLFACEN GLSNRKCTIV IRDEQRSWEF RLYSCGGSTF IGGEWRKFCA  240
ANFLKEGDHI MFEIFSKGEK PILKFCDLRG EASLQPEGKK TNLDSERVST QDLRGNASLQ  300
PEGKKANLHT KRVSSEEKPS PSIKLPNKAS ADAKAAAHHP FGHSKFVCTI RPYCLTYGFL  360
NVPKHFACAN GLKPNKKCIL IIRDERQGSW TLRLSVCKTQ VYIGDGLRKF IADNCLKEGD  420
RIMFEVVTSG ETPIWKFQVV TSGKDSNEEV SR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00260.13e-36B3 family protein