PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS97641
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 491aa    MW: 56066.9 Da    PI: 7.8191
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS97641genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.61.5e-151693998
              HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
        B3  9 dvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                +k+g l +p  f+ ++  g ++   +  +  + g++W+vk+  ++++    l++GW++F+++++L+ gD++vF++dg++ef   v +f+
  OIS97641 16 PGFKQG-LNIPVGFL-KYlTGHEH---EHAVLKRAGKKWQVKV--NGRR----LEEGWEKFAEEHDLQLGDMLVFRHDGNMEF--EVVIFD 93
              455555.9*******.66554533...4577889*********..8888....**************************9999..777766 PP
2B345.91e-14143224489
               E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
        B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                +++s+  ++g l lpk+fa ++++ + ++  l+++des r W+++l    +++r+ + + WkeF  an+Lk+g+ ++F+++ + +
  OIS97641 143 CTVRSYWVSNGYLFLPKQFALANSLTN-KNCGLIIRDESQRPWNLRL--ATYGSRVCIVGRWKEFIVANDLKVGECIMFEVVTN-G 224
               56789999***************5543.33469**************..99999**************************8764.3 PP
3B353.44.7e-17265346590
               -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
        B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
               +++++ l++g l+lp +fa+++g+ + ++  l+++de+ r+W+++l    +++++ + +GW+eF  an+Lk+gD ++F+++ + + 
  OIS97641 265 TVKPYFLTKGYLRLPMQFARANGLTN-KNCGLIIRDETQRRWNLRL--ATYGSQVCIVGGWNEFHAANDLKVGDCIMFEVVTN-GD 346
               5679999***************7664.44579**************..999999*************************8764.33 PP
4B356.26.4e-18386470593
               -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
        B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
               +++++ l++++l++pk+fa ++g+ + ++ +l+++de  r W+v+l  +  ++++++++GW eF +a+ LkegD ++F+l+ + + ++ 
  OIS97641 386 TVRPYCLSNDLLYIPKQFALANGLTN-KNCDLIIRDELQRPWNVRL--CSFGNSVFIRGGWHEFRNAKCLKEGDCIMFELVTN-GNKPI 470
               578999****************8874.6679***************..888888*************************9874.44455 PP
Sequence ? help Back to Top
Protein Sequence    Length: 491 aa     Download sequence    
MKVRPVKPHF FKPIQPGFKQ GLNIPVGFLK YLTGHEHEHA VLKRAGKKWQ VKVNGRRLEE  60
GWEKFAEEHD LQLGDMLVFR HDGNMEFEVV IFDSGHCDRE YVENLQEEAE AEEGQGGEEE  120
EEGRGGEEEQ GEEANFGQSL FECTVRSYWV SNGYLFLPKQ FALANSLTNK NCGLIIRDES  180
QRPWNLRLAT YGSRVCIVGR WKEFIVANDL KVGECIMFEV VTNGEKPIWQ FHVKPNPIIM  240
SSRKAFRNEE SANHSPSGQS LLLLTVKPYF LTKGYLRLPM QFARANGLTN KNCGLIIRDE  300
TQRRWNLRLA TYGSQVCIVG GWNEFHAAND LKVGDCIMFE VVTNGDKPIR KFHDKPNPGM  360
KSSSKAFPYA GTDTHKPFSR SHFVCTVRPY CLSNDLLYIP KQFALANGLT NKNCDLIIRD  420
ELQRPWNVRL CSFGNSVFIR GGWHEFRNAK CLKEGDCIMF ELVTNGNKPI LKFNGKMSGE  480
DTNIIQGITE Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26680.17e-46B3 family protein