PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS97638
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 396aa    MW: 45680.7 Da    PI: 8.6452
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS97638genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.14.4e-15361121399
               TT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
        B3  13 sgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
               ++ l +p  f+ ++ +g   e+++  +  + g++W vk+  ++++    +++GW eF+++++L+ gD+++F+++g++ef  +v++f++
  OIS97638  36 RDGLKIPTGFL-KYlKGH--EHIEHAIIRRAGKKWLVKV--NGRR----FEAGWAEFAQQHDLQLGDVLIFRHEGNMEF--KVTIFES 112
               4569*******.564666..56788999***********..8887....9************************99999..9999876 PP
2B354.32.4e-17207288590
               -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
        B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
               +++++ l+ g l+lp +fa+  + +ke   +l+++de+ r W++kl+ + +++r+ +++GW++F  +n+LkegD +vF+++ ++e+
  OIS97638 207 TIKPYCLTYGYLYLPQPFANGLS-NKE--CELIIRDERQRLWNLKLS-SDCKNRVCIGDGWRKFIADNRLKEGDRIVFEVVTDEET 288
               678999999*********94443.333..48***************5.788889*************************8876444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    
MKNNQRKRYL FSSVITAMKI PPKNPQFFKP ILPGFRDGLK IPTGFLKYLK GHEHIEHAII  60
RRAGKKWLVK VNGRRFEAGW AEFAQQHDLQ LGDVLIFRHE GNMEFKVTIF ESSGSVKEYL  120
QEKVHTTVEE TSKNLEEFED TNNYASISSG DQLHESSMSV SRHLSHSRNT NNVIEIPNTR  180
IESSDQDCSH AEAATDKHID HSHFVCTIKP YCLTYGYLYL PQPFANGLSN KECELIIRDE  240
RQRLWNLKLS SDCKNRVCIG DGWRKFIADN RLKEGDRIVF EVVTDEETSV WKFHVVTDAE  300
TPKHKLFQNA TEKPEPNIMS SHKVVFDVEA AKDMPHFIST VKPHHISKCR MHVPKLFARE  360
NGLSNRQYLR ANAPLQPEER KPNSDAKRVS TQGQDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.12e-38B3 family protein