PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIS97633 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | HSF | ||||||||
Protein Properties | Length: 135aa MW: 15478.8 Da PI: 5.1098 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 80.7 | 2.3e-25 | 23 | 81 | 2 | 60 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 Fl+k+y++++d++ ++++sw en ++fvv+++ efak+ Lp+yFkh+nf+SFvRQLn+Y OIS97633 23 FLTKTYQLVDDQSSNHIVSWGENDTTFVVWKPLEFAKEHLPNYFKHNNFSSFVRQLNTY 81 9*********************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence |
MSSSSEMNFT VQDCQRTIMA APFLTKTYQL VDDQSSNHIV SWGENDTTFV VWKPLEFAKE 60 HLPNYFKHNN FSSFVRQLNT YVAPVELFFI IRLDKIVGVG DVGFEGLIKV SLRMNDFSLL 120 TPDFMLEKIV SLSTI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G46264.1 | 3e-33 | HSF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIS97633 |