PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIS97556 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | G2-like | ||||||||
Protein Properties | Length: 424aa MW: 48962.1 Da PI: 5.9975 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 98.7 | 4e-31 | 263 | 317 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rW+++LHerF+++v++LGG++kAtPk+il+lm+ +gLtl+hvkSHLQkYR OIS97556 263 KTRIRWSEDLHERFLDCVNRLGGADKATPKQILNLMDSEGLTLDHVKSHLQKYRN 317 68****************************************************6 PP | |||||||
2 | Myb_DNA-binding | 48.5 | 2e-15 | 267 | 316 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rW+++++e+++d+v++lGg t+k I + m +g+tl ++ks++qky+ OIS97556 267 RWSEDLHERFLDCVNRLGGAdkaTPKQILNLMDsEGLTLDHVKSHLQKYR 316 9*****************99*****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 424 aa Download sequence |
MSIQRIFTQD RAHQSNEFSS DYTLDFPKIS AQDLVAQQQY SSYMGFCFQP EEGRRQQHQQ 60 SCNLPMISFF GSPSSAFFAT ERCLGLTQHD NQDNTSQLML NNNDLNQDHT SQLMIDNYDL 120 NQDNTSQLIN NYDIQLSSYD PQQSRNGFLT DSIAQPEPDF QHNISLPSFI RPEFSTSQPL 180 RRHYSFSDVS EKERMLHLKN ELLGEFDPSY RRHPSIPFDG NQNYSISHDF CGCPLEKMRQ 240 RCASPSLTSR NSASSGVSNK HSKTRIRWSE DLHERFLDCV NRLGGADKAT PKQILNLMDS 300 EGLTLDHVKS HLQKYRNAKH IPESTETGKS EKRNSPDNVT EIEAKTGIEI KEALKMQLEV 360 QRCLHEQLET QRTLQMRIEE QAKKLKRIFD RQQRTNRNLL ERQNSSISSP AQDDAEILDV 420 EDSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.1 | 3e-57 | G2-like family protein |
Link Out ? help Back to Top | |
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Ensembl | OIS97556 |