PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS97546
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 386aa    MW: 41912.9 Da    PI: 6.9742
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS97546genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.19.2e-184089255
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
              +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  OIS97546 40 RYRGVRRRP-WGRYAAEIRDPQ----SkERKWLGTFDTAEEAACAYDCAARAMRG 89
              59*******.**********93....35*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MQDAIKPFQT NISSTLFKRR GTNKRPLKDR AGGGGGGTMR YRGVRRRPWG RYAAEIRDPQ  60
SKERKWLGTF DTAEEAACAY DCAARAMRGV KARTNFVYPP PAHPTTITTD SFLNIPLLNY  120
TSTKAANCYH QLCLKDLPIR QFFQSSPQKS GGDVAGKTAL EESSDSLNLL LFHEILNSSS  180
DSPLSSNTDL NMNINITPLD EQLPLLFNGN STSFSTSSAT FAGSSSSSLV NQCCLISAPK  240
ATGYSISSFA AMTPQKVKDD QINNSSSVDS GMDFFPTVPS DSGFLEQALN GFFPKPTPMS  300
SDDFCAKQSN DDVKNHLGFC IDEGGAAGIS LPYCNNGFRS SQLSSLPIDQ DFPVNIGQLS  360
TENLLGDMSF HYSDLLNILA AKMKNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.11e-13ERF family protein