PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS97502

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

GRF

Protein Properties

Length: 324aa MW: 36271.4 Da PI: 8.8768

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS97502	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77	1.8e-24	66	110	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ OIS97502 66 DPEPGRCRRTDGKKWRCSKDAHPDSKYCERHMHRGRNRSRKPVES 110 79****************************************986 PP
2	QLQ	66.1	8.6e-23	5	40	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTa Q+q+L++Q+++yKyL+a++PvPp+L+++i++ OIS97502 5 PFTAVQWQELEHQAMIYKYLVAGMPVPPDLVVPIRR 40 9*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
GFRPPFTAVQ WQELEHQAMI YKYLVAGMPV PPDLVVPIRR SFDAISARFF NHPSLSYCSY 60 YGKKFDPEPG RCRRTDGKKW RCSKDAHPDS KYCERHMHRG RNRSRKPVES QSTSQSLSTT 120 ISHITTGSSN RTGSFLSNSS GSFQNMPLYS VATSDVLSYG STATKLQMEP VSYGINNKEY 180 RYLHGMAPDA DDSSEVSASV RSLGMGSNTD NMWRLMPSQV PSKPTVNPKN DSQLPGSSPH 240 PFEPVIDATI AKQPQHCFFS NDIGSPVKQE PHPMRSFFDE WPTSKESWSN LDEEYGKNNF 300 STTQLSISTP NAHTGFSSMS TRSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-48	GRF family protein

Link Out ? help Back to Top
Ensembl	OIS97502