PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS97127

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

ARR-B

Protein Properties

Length: 477aa MW: 53176 Da PI: 5.3866

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS97127	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	63.9	2.9e-20	206	262	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGG..sekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rW++e+H++F++a qL +k +Pk+ile+m+ +g+t+e+v+SHLQk+R OIS97127 206 KNRMRWSKEMHQKFLDAYYQLEAdsLDKVVPKRILEIMNEPGITRENVASHLQKFRN 262 78*****************642268***************************5 PP
2	Myb_DNA-binding	25.6	2.9e-08	208	261	1	48
TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....tWktIartmg.kgRtlkqcksrwqkyl 48 r+rW++e +++++da ql + +k+I + m+ g t++++ s++qk++ OIS97127 208 RMRWSKEMHQKFLDAYYQLEADsldkvVPKRILEIMNePGITRENVASHLQKFR 261 89**************************************************97 PP
3	Response_reg	74.7	3.6e-25	29	139	1	111
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl +dD+ + +++l ++lek gy v++++++ e le+l++++ +D++++D+ +mdG++ll+ i e ++p+i+ +a+g+ +++e +k Ga+ OIS97127 29 VLAIDDNVVCLKVLGSVLEKCGY-TVTTTRNANEGLEMLRKNKesFDIVITDVVRDDMDGFKLLEAIGLEM-DIPVIMTSANGDTRTIVEGIKNGAR 123 7899*****************.***********888889******************6654.8******************** PP EEEESS--HHHHHHHH CS Response_reg 96 dflsKpfdpeelvkav 111 d+l+Kp+++e++ + + OIS97127 124 DYLVKPVKMEDVKNII 139 ********998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MSLVTNEECL NPLLVNAKQK SQSTKGLKVL AIDDNVVCLK VLGSVLEKCG YTVTTTRNAN 60 EGLEMLRKNK ESFDIVITDV VRDDMDGFKL LEAIGLEMDI PVIMTSANGD TRTIVEGIKN 120 GARDYLVKPV KMEDVKNIIQ HVTSKNTIEE DESPISGNDT NIDTNELVQE SSTLLVKRKS 180 KNSLQYEDEE TNTGSSGGES CPPRKKNRMR WSKEMHQKFL DAYYQLEADS LDKVVPKRIL 240 EIMNEPGITR ENVASHLQKF RNGLKKQNAI LNQDSHWKSD ANNIARKLPE TSNNNMFANH 300 KACLVPRNQY EQVLFQQNAL PVGNFAPIST YSMLDNRVYR PVLDANALSQ PDLKRWRRKM 360 DDELLKIPHN YANFGSGQFY QDPVSSAPVS LNYVGTPYQM FGQVSVSPQM TYISPFDSTG 420 LVSSTPGQLE GGDLVSLNGR GVPDFGVGAN GSPINFSLDD DLSTIVQQFQ DISAPRL

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MSLVTNEECL NPLLVNAKQK SQSTKGLKVL AIDDNVVCLK VLGSVLEKCG YTVTTTRNAN  60
EGLEMLRKNK ESFDIVITDV VRDDMDGFKL LEAIGLEMDI PVIMTSANGD TRTIVEGIKN  120
GARDYLVKPV KMEDVKNIIQ HVTSKNTIEE DESPISGNDT NIDTNELVQE SSTLLVKRKS  180
KNSLQYEDEE TNTGSSGGES CPPRKKNRMR WSKEMHQKFL DAYYQLEADS LDKVVPKRIL  240
EIMNEPGITR ENVASHLQKF RNGLKKQNAI LNQDSHWKSD ANNIARKLPE TSNNNMFANH  300
KACLVPRNQY EQVLFQQNAL PVGNFAPIST YSMLDNRVYR PVLDANALSQ PDLKRWRRKM  360
DDELLKIPHN YANFGSGQFY QDPVSSAPVS LNYVGTPYQM FGQVSVSPQM TYISPFDSTG  420
LVSSTPGQLE GGDLVSLNGR GVPDFGVGAN GSPINFSLDD DLSTIVQQFQ DISAPRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	7e-64	ARR-B family protein

Link Out ? help Back to Top
Ensembl	OIS97127