PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS97069
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 293aa    MW: 33258.5 Da    PI: 9.9765
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS97069genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.91.6e-17142232199
               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
               f+k +++s+v +  +l lp +f+e+h    ++++ + l de+g ++e  +   +k+ +  l++GW+ F+ +++L++gD +vF+l++ ++f  +v ++r+
  OIS97069 142 FIKSMVRSHVYSCFWLGLPTRFCEDHLP--KSTVNVLLVDEEGSEYEALF--IGKRTG--LSGGWRAFALDHKLDDGDALVFELVEATKF--KVYIVRT 232
               89************************53..36789***************..555544..***********************9987777..8888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MANENGTTSY EEVRRQRVLD NKKRFEDLGI LSISKNLSDL AKSEKKSDKK YEVTRVRQKA  60
NDVYMLEPRR SGRDRNPVPS YRDDIDMELP SFRNRSRLSS SWASYLARPL EEVKMASCQA  120
RAQAIKSAEK LQSNLQSANP SFIKSMVRSH VYSCFWLGLP TRFCEDHLPK STVNVLLVDE  180
EGSEYEALFI GKRTGLSGGW RAFALDHKLD DGDALVFELV EATKFKVYIV RTSHCSSRED  240
KSGAEKGENE AEETSKSVTK KRKKSSKQSE VPTVAKEEIS VAASATRRST RRK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1260264KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.16e-70B3 family protein